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Support counts the member genes carrying the term. % of genes is that count over all 781 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00176 | SNF2-rel_dom — SNF2-related domain | 592 / 781 | 75.8% | 89.7% of 660 | ≥50% support |
| Pfam | PF00271 | Helicase_C — Helicase conserved C-terminal domain | 530 / 781 | 67.9% | 80.3% of 660 | ≥50% support |
| GO | GO:0140658 Molecular Function | ATP-dependent chromatin remodeler activity | 599 / 781 | 76.7% | 86.3% of 694 | ≥50% support |
| GO | GO:0005524 Molecular Function | ATP binding | 593 / 781 | 75.9% | 85.5% of 694 | ≥50% support |
| GO | GO:0005634 Cellular Component | nucleus | 498 / 781 | 63.8% | 71.8% of 694 | ≥50% support |
| GO | GO:0006338 Biological Process | chromatin remodeling | 418 / 781 | 53.5% | 60.2% of 694 | ≥50% support |
| GO | GO:0003682 Molecular Function | chromatin binding | 405 / 781 | 51.9% | 58.4% of 694 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Palythoa mizigama | c0042.g045.t1.p1 | XP_044168829.1 | chromodomain-helicase-DNA-binding protein 1-like isoform X2 [Acropora millepora] | Q7ZU90 Chromodomain-helicase-DNA-binding protein 1-like OS=Danio re | JBrowse |
| Palythoa mizigama | c0053.g009.t1.p1 | CAH3125791.1 | unnamed protein product [Pocillopora meandrina] | Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Palythoa mizigama | c0053.g011.t1.p1 | EDO40761.1 | predicted protein [Nematostella vectensis] | O60264 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Palythoa mizigama | c0455.g008.t1.p1 | XP_032219378.2 | lymphocyte-specific helicase isoform X3 [Nematostella vectensis] | Q9NRZ9 Lymphoid-specific helicase OS=Homo sapiens OX=9606 GN=HELLS | JBrowse |
| Palythoa mizigama | c1571.g006.t1.p1 | CEL67588.1 | TPA: Probable chromatin-remodeling complex ATPase chain [Neospora caninum Liverpool] | Q91ZW3 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Palythoa mizigama | c1588.g006.t1.p1 | XP_029215955.1 | SWI2/SNF2 ISWI-like SANT [Besnoitia besnoiti] | Q7G8Y3 Probable chromatin-remodeling complex ATPase chain OS=Oryza | JBrowse |
| Palythoa mizigama | c1588.g006.t2.p1 | KAF8817877.1 | SWI2/SNF2 ISWI-like SANT, partial [Cardiosporidium cionae] | P28370 SWI/SNF-related matrix-associated actin-dependent regulator | JBrowse |
| Palythoa mizigama | c2555.g005.t1.p1 | ETW33295.1 | hypothetical protein PFTANZ_05986, partial [Plasmodium falciparum Tanzania (2000708)] | Q08773 ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyc | JBrowse |
| Palythoa mizigama | c3437.g001.t1.p1 | CAH3149874.1 | unnamed protein product [Porites lobata] | Q7ZU90 Chromodomain-helicase-DNA-binding protein 1-like OS=Danio re | JBrowse |
| Palythoa mizigama | c3437.g001.t2.p1 | CAH3149874.1 | unnamed protein product [Porites lobata] | Q7ZU90 Chromodomain-helicase-DNA-binding protein 1-like OS=Danio re | JBrowse |
