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Support counts the member genes carrying the term. % of genes is that count over all 2,277 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| Pfam | PF00058 | Ldl_recept_b — Low-density lipoprotein receptor repeat class B | 1757 / 2,277 | 77.2% | 92.7% of 1,895 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G135250 | XP_028404464.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paragorgia papillata | Ppa0G224650 | XP_046864726.1 | low-density lipoprotein receptor-related protein 4-like [Xenia sp. Carnegie-2017] | Q99087 Low-density lipoprotein receptor 1 OS=Xenopus laevis OX=8355 | JBrowse |
| Paragorgia papillata | Ppa0G224660 | XP_028413503.1 | low-density lipoprotein receptor-related protein 4-like isoform X2 [Dendronephthya gigantea] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Paragorgia papillata | Ppa0G227090 | XP_028404464.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | Q99087 Low-density lipoprotein receptor 1 OS=Xenopus laevis OX=8355 | JBrowse |
| Paragorgia papillata | Ppa0G270960 | XP_028407153.1 | low-density lipoprotein receptor-related protein 4-like [Dendronephthya gigantea] | O75096 Low-density lipoprotein receptor-related protein 4 OS=Homo s | JBrowse |
| Paragorgia papillata | Ppa0G326130 | XP_028410898.1 | uncharacterized protein LOC114533564 isoform X1 [Dendronephthya gigantea] | O88572 Low-density lipoprotein receptor-related protein 6 OS=Mus mu | JBrowse |
| Paragorgia papillata | Ppa0G326140 | XP_028394968.1 | LOW QUALITY PROTEIN: uncharacterized protein LOC114519101 [Dendronephthya gigantea] | O75581 Low-density lipoprotein receptor-related protein 6 OS=Homo s | JBrowse |
| Paragorgia papillata | Ppa0G344930 | CAB4008631.1 | low-density lipo receptor-related 4, partial [Paramuricea clavata] | P98157 Low-density lipoprotein receptor-related protein 1 OS=Gallus | JBrowse |
| Paragorgia papillata | Ppa0G344990 | CAB4007042.1 | very low-density lipo receptor-like isoform X1, partial [Paramuricea clavata] | Q9NZR2 Low-density lipoprotein receptor-related protein 1B OS=Homo | JBrowse |
| Paragorgia papillata | Ppa0G360620 | XP_028404464.1 | low-density lipoprotein receptor-related protein 8-like [Dendronephthya gigantea] | C0HL13 Low-density lipoprotein receptor-related protein 2 OS=Sus sc | JBrowse |
| Paragorgia papillata | Ppa0G363010 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | Q9JI18 Low-density lipoprotein receptor-related protein 1B OS=Mus m | JBrowse |
| Paragorgia papillata | Ppa0G378780 | CAB3988720.1 | very low-density lipo receptor-like isoform X2 [Paramuricea clavata] | Q9JI18 Low-density lipoprotein receptor-related protein 1B OS=Mus m | JBrowse |
