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This orthogroup contains 206 genes from 139 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 206 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46259 | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 | 180 / 206 | 87.4% | 98.4% of 183 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 168 / 206 | 81.6% | 93.9% of 179 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 182 / 206 | 88.4% | 99.5% of 183 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 181 / 206 | 87.9% | 98.9% of 183 | ≥80% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 180 / 206 | 87.4% | 98.4% of 183 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 169 / 206 | 82.0% | 92.4% of 183 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 165 / 206 | 80.1% | 90.2% of 183 | ≥80% support |
| Pfam | PF00098 | zf-CCHC — Zinc knuckle | 135 / 206 | 65.5% | 75.4% of 179 | ≥50% support |
| KEGG | K13154 | ZCRB1 — Spliceosome | 155 / 206 | 75.2% | 98.7% of 157 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Paragorgia papillata | Ppa0G143660 | XP_028413320.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Dendronephthya gigantea] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
