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Support counts the member genes carrying the term. % of genes is that count over all 206 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR46259 | ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF-CONTAINING PROTEIN 1 | 180 / 206 | 87.4% | 98.4% of 183 | ≥80% support |
| Pfam | PF00076 | RRM_1 — RNA recognition motif | 168 / 206 | 81.6% | 93.9% of 179 | ≥80% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 182 / 206 | 88.4% | 99.5% of 183 | ≥80% support |
| GO | GO:0000398 Biological Process | mRNA splicing, via spliceosome | 181 / 206 | 87.9% | 98.9% of 183 | ≥80% support |
| GO | GO:0005689 Cellular Component | U12-type spliceosomal complex | 180 / 206 | 87.4% | 98.4% of 183 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 169 / 206 | 82.0% | 92.4% of 183 | ≥80% support |
| GO | GO:0008270 Molecular Function | zinc ion binding | 165 / 206 | 80.1% | 90.2% of 183 | ≥80% support |
| Pfam | PF00098 | zf-CCHC — Zinc knuckle | 135 / 206 | 65.5% | 75.4% of 179 | ≥50% support |
| KEGG | K13154 | ZCRB1 — Spliceosome | 155 / 206 | 75.2% | 98.7% of 157 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Acropora acuminata | aacu_s0162.g26.t1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora acuminata | aacu_s0162.g26.t2 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Aurelia aurita | scaffold1244.g1.t1 | none | – | JBrowse | |
| Aurelia aurita | scaffold72.g55.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold142.g12.t1 | none | – | JBrowse | |
| Acropora austera | ENSKKQP00000006372.1 | XP_015773193.1 | PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora digitifera] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora awi | aawi_s0083.g28.t1 | XP_015773193.1 | PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora digitifera] | Q56JZ7 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora cervicornis | KAK2570605.1 | XP_015773193.1 | PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora digitifera] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Aurelia coerulea | evm.model.ptg000009l.35 | XP_028413320.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Dendronephthya gigantea] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora cytherea | acyt_s0108.g44.t1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora digitifera | chr12Alt.g25048.t1 | none | – | JBrowse | |
| Acropora echinata | aech_s0150.g25.t1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Actinia equina | EGACTEQ4350051349-PA | XP_031558087.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Actinia tenebrosa] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Actinia equina | EGACTEQ4350054079-PA | XP_031558087.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Actinia tenebrosa] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora florida | aflo_s0165.g2.t1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora gemmifera | agem_s0076.g24.t1 | XP_015773193.1 | PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora digitifera] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora gemmifera | agem_s0076.g24.t2 | XP_015773193.1 | PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora digitifera] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora hemprichii | Ahemp_017294-T1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Acropora hyacinthus | ahya_s0033.g41.t1 | XP_029196676.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1-like [Acropora millepora] | Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
| Alvinactis idsseensis sp. Nov. | alvinactis_v1_g5179 | XP_020912290.1 | zinc finger CCHC-type and RNA-binding motif-containing protein 1 [Exaiptasia diaphana] | Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing prote | JBrowse |
