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This orthogroup contains 53 genes from 13 species. The functional annotation below is the consensus of the family's member genes — each term is reported with the number of member genes that carry it.
Support counts the member genes carrying the term. % of genes is that count over all 53 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR22648 | TRANSCRIPTION TERMINATION FACTOR NUSA | 48 / 53 | 90.6% | 98.0% of 49 | ≥80% support |
| Pfam | PF13184 | KH_5 — NusA-like KH domain | 45 / 53 | 84.9% | 90.0% of 50 | ≥80% support |
| Pfam | PF08529 | NusA_N — NusA N-terminal domain | 44 / 53 | 83.0% | 88.0% of 50 | ≥80% support |
| GO | GO:0006353 Biological Process | DNA-templated transcription termination | 49 / 53 | 92.5% | 96.1% of 51 | ≥80% support |
| GO | GO:0031564 Biological Process | transcription antitermination | 49 / 53 | 92.5% | 96.1% of 51 | ≥80% support |
| GO | GO:0003723 Molecular Function | RNA binding | 48 / 53 | 90.6% | 94.1% of 51 | ≥80% support |
| GO | GO:0005829 Cellular Component | cytosol | 48 / 53 | 90.6% | 94.1% of 51 | ≥80% support |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 45 / 53 | 84.9% | 88.2% of 51 | ≥80% support |
| GO | GO:0031554 Biological Process | regulation of termination of DNA-templated transcription | 45 / 53 | 84.9% | 88.2% of 51 | ≥80% support |
| Pfam | PF00575 | S1 | 27 / 53 | 50.9% | 54.0% of 50 | ≥50% support |
| GO | GO:0003676 Molecular Function | nucleic acid binding | 39 / 53 | 73.6% | 76.5% of 51 | ≥50% support |
| GO | GO:0000166 Molecular Function | nucleotide binding | 30 / 53 | 56.6% | 58.8% of 51 | ≥50% support |
| KEGG | K02600 | nusA — Ribosome biogenesis | 36 / 53 | 67.9% | 100.0% of 36 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Actinernus sp. WN-2022 | Acti_006303-T1 | none | – | JBrowse | |
| Calvadosia cruxmelitensis | g290.t1 | XP_047126633.1 | advillin [Hydra vulgaris] | Q9WU06 Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=2 | JBrowse |
| Calvadosia cruxmelitensis | g886.t1 | XP_047141777.1 | hydroxyproline dehydrogenase isoform X2 [Hydra vulgaris] | Q04499 Proline dehydrogenase 1, mitochondrial OS=Drosophila melanog | JBrowse |
| Cassiopea xamachana | Cxam_g18089.t1 | MBN2490037.1 | transcription termination factor NusA [Planctomycetota bacterium] | P32727 Transcription termination/antitermination protein NusA OS=Ba | JBrowse |
| Cassiopea xamachana | Cxam_g5517.t1 | WP_170418208.1 | transcription termination factor NusA [Ruegeria atlantica] | Q92HF4 Transcription termination/antitermination protein NusA OS=Ri | JBrowse |
| Hydractinia echinata | ENSDJXP00000052842.1 | MBQ4874998.1 | transcription termination factor NusA [Rickettsiaceae bacterium H1] | Q9ZCZ7 Transcription termination/antitermination protein NusA OS=Ri | JBrowse |
| Hydractinia echinata | ENSDJXP00000052850.1 | MBQ4874998.1 | transcription termination factor NusA [Rickettsiaceae bacterium H1] | Q92HF4 Transcription termination/antitermination protein NusA OS=Ri | JBrowse |
| Hydra oligactis | HOLI00001.G52121 | WP_095159739.1 | MULTISPECIES: transcription termination factor NusA [unclassified Pseudomonas] | P0AFF8 Transcription termination/antitermination protein NusA OS=Es | JBrowse |
| Hydra oligactis | HOLI00002.G17436 | MCD6019890.1 | transcription termination/antitermination protein NusA [Bacteroidota bacterium] | P48514 Transcription termination/antitermination protein NusA OS=Th | JBrowse |
| Hydra oligactis | HOLI00522.G17053 | WP_208930635.1 | transcription termination factor NusA [Rheinheimera sp. F8] | P0AFF8 Transcription termination/antitermination protein NusA OS=Es | JBrowse |
| Hydra oligactis | HOLI00522.G17054 | WP_019027810.1 | transcription termination factor NusA [Colwellia piezophila] | Q83BS0 Transcription termination/antitermination protein NusA OS=Co | JBrowse |
| Hydra oligactis | HOLI00522.G17055 | WP_031568365.1 | transcription termination factor NusA [Pararheinheimera texasensis] | P0AFF8 Transcription termination/antitermination protein NusA OS=Es | JBrowse |
| Hydra oligactis | HOLI00655.G57010 | CAE7932375.1 | yejF [Symbiodinium necroappetens] | Q83BS0 Transcription termination/antitermination protein NusA OS=Co | JBrowse |
| Hydra oligactis | HOLI01529.G35429 | MCL4397773.1 | transcription termination factor NusA [Patescibacteria group bacterium] | Q9KA74 Transcription termination/antitermination protein NusA OS=Ha | JBrowse |
| Hydra oligactis | HOLI02195.G14018 | WP_063460731.1 | transcription termination factor NusA [Acidovorax sp. GW101-3H11] | P0AFF8 Transcription termination/antitermination protein NusA OS=Es | JBrowse |
| Hydra oligactis | HOLI03692.G28514 | MBX9808934.1 | transcription termination factor NusA [Candidatus Gracilibacteria bacterium] | P32727 Transcription termination/antitermination protein NusA OS=Ba | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g17.25727_t1 | MCL2720200.1 | transcription termination factor NusA [Treponema sp.] | O51740 Transcription termination/antitermination protein NusA OS=Bo | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g17.25728_t1 | MBL7006763.1 | transcription termination/antitermination protein NusA [Spirochaetia bacterium] | – | JBrowse |
| Hydra viridissima | BRAKERKREP00000022718.1 | WP_066420388.1 | transcription termination factor NusA [Bordetella ansorpii] | Q83BS0 Transcription termination/antitermination protein NusA OS=Co | JBrowse |
| Hydra viridissima | g20274.t1.1 | none | – | JBrowse |
