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Support counts the member genes carrying the term. % of genes is that count over all 47 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30437 | TRANSCRIPTION ELONGATION FACTOR GREA | 29 / 47 | 61.7% | 67.4% of 43 | ≥50% support |
| Pfam | PF01272 | GreA_GreB — Transcription elongation factor, GreA/GreB, C-term | 34 / 47 | 72.3% | 75.6% of 45 | ≥50% support |
| Pfam | PF03449 | GreA_GreB_N — Transcription elongation factor, N-terminal | 34 / 47 | 72.3% | 75.6% of 45 | ≥50% support |
| GO | GO:0003677 Molecular Function | DNA binding | 35 / 47 | 74.5% | 77.8% of 45 | ≥50% support |
| GO | GO:0032784 Biological Process | regulation of DNA-templated transcription elongation | 35 / 47 | 74.5% | 77.8% of 45 | ≥50% support |
| GO | GO:0070063 Molecular Function | RNA polymerase binding | 35 / 47 | 74.5% | 77.8% of 45 | ≥50% support |
| GO | GO:0006354 Biological Process | DNA-templated transcription elongation | 29 / 47 | 61.7% | 64.4% of 45 | ≥50% support |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Aurelia aurita complex sp. Pacific | scaffold10.g157.t1 | none | – | JBrowse | |
| Aurelia aurita complex sp. Pacific | scaffold10.g24.t1 | none | – | JBrowse | |
| Calvadosia cruxmelitensis | g173.t1 | XP_001623659.1 | TRPL translocation defect protein 14 [Nematostella vectensis] | Q7K556 TRPL translocation defect protein 14 OS=Drosophila melanogas | JBrowse |
| Calvadosia cruxmelitensis | g2035.t1 | MBU2643482.1 | type II secretion system secretin GspD [bacterium] | P45779 Secretin GspD OS=Vibrio cholerae serotype O1 (strain ATCC 39 | JBrowse |
| Cassiopea xamachana | Cxam_g4224.t1 | WP_170402809.1 | transcription elongation factor GreA [Ruegeria arenilitoris] | Q5LXA4 Transcription elongation factor GreA OS=Ruegeria pomeroyi (s | JBrowse |
| Hydra oligactis | HOLI00001.G52129 | AZL71398.1 | transcription elongation factor GreA [Pseudomonas oryziphila] | Q88DU7 Transcription elongation factor GreA OS=Pseudomonas putida ( | JBrowse |
| Hydra oligactis | HOLI00002.G20216 | MBL7893871.1 | GreA/GreB family elongation factor [Bacteroidia bacterium] | – | JBrowse |
| Hydra oligactis | HOLI00002.G22070 | MBA4239111.1 | transcription elongation factor GreA [Sphingobacteriaceae bacterium] | A5FJJ8 Transcription elongation factor GreA OS=Flavobacterium johns | JBrowse |
| Hydra oligactis | HOLI00059.G26460 | WP_105259696.1 | transcription elongation factor GreA [Rhodoferax sp. TS-BS-61-7] | A1WH11 Transcription elongation factor GreA OS=Verminephrobacter ei | JBrowse |
| Hydra oligactis | HOLI00256.G40586 | WP_031570284.1 | transcription elongation factor GreB [Pararheinheimera texasensis] | Q87TB8 Transcription elongation factor GreB OS=Vibrio parahaemolyti | JBrowse |
| Hydra oligactis | HOLI00256.G40603 | TXH97774.1 | type II secretion system protein GspD [Rheinheimera sp.] | P45779 Secretin GspD OS=Vibrio cholerae serotype O1 (strain ATCC 39 | JBrowse |
| Hydra oligactis | HOLI00264.G3339 | WP_094287859.1 | MULTISPECIES: transcription elongation factor GreA [Acidovorax] | A1WH11 Transcription elongation factor GreA OS=Verminephrobacter ei | JBrowse |
| Hydra oligactis | HOLI00504.G55311 | WP_095156814.1 | MULTISPECIES: PHP domain-containing protein [unclassified Pseudomonas] | P44176 5'-3' exoribonuclease OS=Haemophilus influenzae (strain ATCC | JBrowse |
| Hydra oligactis | HOLI00522.G17067 | WP_031568375.1 | transcription elongation factor GreA [Pararheinheimera texasensis] | P0A6W7 Transcription elongation factor GreA OS=Escherichia coli O15 | JBrowse |
| Hydra oligactis | HOLI00522.G17068 | TXH96335.1 | carbamoyl-phosphate synthase large subunit [Rheinheimera sp.] | Q87SF3 Carbamoyl phosphate synthase large chain OS=Vibrio parahaemo | JBrowse |
| Hydra oligactis | HOLI00580.G30107 | WP_233245025.1 | hypothetical protein [Acidovorax sp. HMWF029] | P31780 Secretin ExeD OS=Aeromonas hydrophila OX=644 GN=exeD PE=1 SV | JBrowse |
| Hydra oligactis | HOLI02859.G40009 | WP_031571085.1 | PHP domain-containing protein [Pararheinheimera texasensis] | P77766 5'-3' exoribonuclease Rnm OS=Escherichia coli (strain K12) O | JBrowse |
| Hydra oligactis | HOLI02859.G40080 | WP_217666633.1 | secretin N-terminal domain-containing protein [Arsukibacterium indicum] | – | JBrowse |
| Hydractinia symbiolongicarpus | HSymV2.0_g02.02757_t1 | MBQ4874714.1 | transcription elongation factor GreA [Rickettsiaceae bacterium H1] | A8F083 Transcription elongation factor GreA OS=Rickettsia canadensi | JBrowse |
| Hydra viridissima | BRAKERKREP00000022649.1 | WP_175131496.1 | 3',5'-nucleoside bisphosphate phosphatase [Achromobacter pulmonis] | Q7NXD4 3',5'-nucleoside bisphosphate phosphatase OS=Chromobacterium | JBrowse |
