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Support counts the member genes carrying the term. % of genes is that count over all 5 members — the strict reading of “the whole family agrees”. % annotated is the same count over only those members for which this database has a prediction of that type, which shows how uniform the evidence is where evidence exists.
| Source | Term | Name / description | Support | % of genes | % annotated | Consistency |
|---|---|---|---|---|---|---|
| PANTHER | PTHR30136 | HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| Pfam | PF01614 | IclR — Bacterial transcriptional regulator | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| Pfam | PF09339 | HTH_IclR — IclR helix-turn-helix domain | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0003677 Molecular Function | DNA binding | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0003700 Molecular Function | DNA-binding transcription factor activity | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0006355 Biological Process | regulation of DNA-templated transcription | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
| GO | GO:0045892 Biological Process | negative regulation of DNA-templated transcription | 5 / 5 | 100.0% | 100.0% of 5 | 100% consensus |
Column guide: Top NCBI-NR hit and Top UniProt hit are the closest characterised sequences found by homology search — they are not identifiers of the CnidoSite gene itself. Where a species has no Swiss-Prot hit above threshold the UniProt column is shown as –. Click a gene ID for its full annotation page.
| Species | Gene ID | Top NCBI-NR hit (accession) |
Top NCBI-NR hit description (source organism) |
Top UniProt hit (Swiss-Prot) |
Genome browser |
|---|---|---|---|---|---|
| Cassiopea xamachana | Cxam_g2949.t1 | WP_246937841.1 | IclR family transcriptional regulator [Aliiroseovarius sp. F20344] | – | JBrowse |
| Cassiopea xamachana | Cxam_g634.t1 | WP_217353205.1 | MULTISPECIES: IclR family transcriptional regulator [Ruegeria] | A1B8Z4 HTH-type transcriptional regulator BhcR OS=Paracoccus denitr | JBrowse |
| Hydra oligactis | HOLI00264.G3450 | WP_252658222.1 | IclR family transcriptional regulator [Acidovorax kalamii] | P16528 Transcriptional repressor IclR OS=Escherichia coli (strain K | JBrowse |
| Hydra oligactis | HOLI00655.G56689 | WP_105259627.1 | IclR family transcriptional regulator [Rhodoferax sp. TS-BS-61-7] | P77300 HTH-type transcriptional regulator XynR OS=Escherichia coli | JBrowse |
| Palythoa mizigama | c2585.g005.t1.p1 | WP_014632278.1 | IclR family transcriptional regulator [Thermus thermophilus] | Q52154 Pca regulon regulatory protein OS=Pseudomonas putida OX=303 | JBrowse |
