Peptides and proteins identified by re-processing the raw mass-spectrometry data of every proteomic dataset with a single documented pipeline (Comet 2026.01 against the CnidoSite reference proteome plus cRAP contaminants, with Percolator target-decoy FDR control). Search parameters are dataset-specific and are shown in full for each dataset; peptides were mapped onto CnidoSite gene models, so every row links to its gene page.
| Gene | Protein | PSMs | Unique peptides | Coverage (%) | Length | Best q-value | Description |
|---|---|---|---|---|---|---|---|
| XP_048586175.1 | NVECT_XP_048586175.1 | 42 | 14 | 45.1 | 441 | 0.0000678288 | RNA-binding protein 4.1 isoform X1 [Nematostella vectensis] |
| XP_048587919.1 | NVECT_XP_048587919.1 | 38 | 14 | 45.5 | 409 | 0.0000678288 | alkaline ceramidase 3 isoform X1 [Nematostella vectensis] |
| XP_001635037.1 | NVECT_XP_001635037.1 | 37 | 14 | 19.7 | 833 | 0.0000678288 | proteasome subunit beta type-3 [Nematostella vectensis] |
| XP_048586587.1 | NVECT_XP_048586587.1 | 36 | 14 | 18.8 | 921 | 0.0000678288 | metastasis-associated protein MTA3 isoform X2 [Nematostella vectensis] |
| XP_001633338.3 | NVECT_XP_001633338.3 | 163 | 13 | 66.4 | 140 | 0.0000678288 | optic atrophy 3 protein homolog [Nematostella vectensis] |
| XP_032232826.2 | NVECT_XP_032232826.2 | 112 | 13 | 58.7 | 172 | 0.0000678288 | uncharacterized protein LOC5508150 isoform X1 [Nematostella vectensis] |
| XP_048587922.1 | NVECT_XP_048587922.1 | 104 | 13 | 71.4 | 140 | 0.0000678288 | DNA polymerase epsilon catalytic subunit A isoform X1 [Nematostella vectensis] |
| XP_032229003.1 | NVECT_XP_032229003.1 | 103 | 13 | 52 | 367 | 0.0000678288 | fibroblast growth factor 1 [Nematostella vectensis] |
| XP_001641608.3 | NVECT_XP_001641608.3 | 91 | 13 | 60.7 | 275 | 0.0000678288 | TNF receptor-associated factor 5 [Nematostella vectensis] |
| XP_001629439.3 | NVECT_XP_001629439.3 | 89 | 13 | 74.2 | 217 | 0.0000678288 | phosphoenolpyruvate phosphomutase [Nematostella vectensis] |
| XP_032241950.1 | NVECT_XP_032241950.1 | 89 | 13 | 50.9 | 287 | 0.0000678288 | MAM and LDL-receptor class A domain-containing protein 1 [Nematostella vectensis] |
| XP_048580957.1 | NVECT_XP_048580957.1 | 87 | 13 | 59.1 | 1080 | 0.0000678288 | uncharacterized protein LOC116606501 isoform X2 [Nematostella vectensis] |
| XP_001631702.1 | NVECT_XP_001631702.1 | 85 | 13 | 60.7 | 262 | 0.0000678288 | gamma-secretase subunit Aph-1 [Nematostella vectensis] |
| XP_048581375.1 | NVECT_XP_048581375.1 | 85 | 13 | 20.6 | 688 | 0.0000678288 | uncharacterized protein LOC116620186 isoform X1 [Nematostella vectensis] |
| XP_048577986.1 | NVECT_XP_048577986.1 | 84 | 13 | 55.1 | 336 | 0.0000678288 | solute carrier organic anion transporter family member 4A1 isoform X1 [Nematostella vectensis] |
| XP_048584453.1 | NVECT_XP_048584453.1 | 82 | 13 | 44 | 366 | 0.0000678288 | gelsolin-like protein 1 [Nematostella vectensis] |
| XP_048586428.1 | NVECT_XP_048586428.1 | 76 | 13 | 58.2 | 297 | 0.0000678288 | carbonic anhydrase 2 isoform X1 [Nematostella vectensis] |
| XP_032239289.1 | NVECT_XP_032239289.1 | 73 | 13 | 46.9 | 326 | 0.0000678288 | low density lipoprotein receptor adapter protein 1-A isoform X2 [Nematostella vectensis] |
| XP_048580259.1 | NVECT_XP_048580259.1 | 73 | 13 | 25.9 | 428 | 0.0000678288 | growth hormone secretagogue receptor type 1 [Nematostella vectensis] |
| XP_048587227.1 | NVECT_XP_048587227.1 | 72 | 13 | 25.2 | 640 | 0.0000678288 | far upstream element-binding protein 3 isoform X2 [Nematostella vectensis] |
| XP_001631360.2 | NVECT_XP_001631360.2 | 68 | 13 | 36.6 | 402 | 0.0000678288 | ras-related protein Rab-10 isoform X1 [Nematostella vectensis] |
| XP_001632974.3 | NVECT_XP_001632974.3 | 66 | 13 | 62.6 | 227 | 0.0000678288 | UPF0686 protein C11orf1 homolog [Nematostella vectensis] |
| XP_048579966.1 | NVECT_XP_048579966.1 | 66 | 13 | 34.1 | 419 | 0.0000678288 | methionine--tRNA ligase, cytoplasmic isoform X2 [Nematostella vectensis] |
| XP_048588188.1 | NVECT_XP_048588188.1 | 66 | 13 | 32 | 547 | 0.0000678288 | propionyl-CoA carboxylase beta chain, mitochondrial [Nematostella vectensis] |
| XP_001633848.1 | NVECT_XP_001633848.1 | 64 | 13 | 52.5 | 263 | 0.0000678288 | tripeptidyl-peptidase 1 [Nematostella vectensis] |
