Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching GO:0043633 across 148 genomes · 71 ms.

Species with hits:Hydra oligactis 6Aurelia aurita complex sp. Pacific 2Hydra viridissima 2Montipora grisea 2Cassiopea xamachana 1
SpeciesGene IDGene Ontology termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g170.t1GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g170.t1GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Cassiopea xamachanaCxam_g3166.t1GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI02969.G47675GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI02969.G47675GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI00001.G52105GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI00001.G52105GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI00150.G2012GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra oligactisHOLI00150.G2012GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023127.1GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023127.1GO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Montipora griseaANN20967-RAGO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse
Montipora griseaANN20967-RAGO:0043633polyadenylation-dependent RNA catabolic processInterproscanJBrowse

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