Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching IPR000055 across 148 genomes · 46 ms.

Species with hits:Hydra oligactis 7Calvadosia cruxmelitensis 3Montipora grisea 3Hydractinia symbiolongicarpus 1
SpeciesGene IDInterPro termMatchSourceBrowser
Calvadosia cruxmelitensisg372.t1IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Calvadosia cruxmelitensisg372.t1IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Calvadosia cruxmelitensisg376.t1IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46714IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00299.G46714IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51266IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52412IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52412IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10078IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10078IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g17.25676_t1IPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Montipora griseaANN25125-RAIPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Montipora griseaANN21026-RAIPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse
Montipora griseaANN21026-RAIPR000055Type I restriction modification DNA specificity domainInterproscanJBrowse

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