Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 21 gene–annotation pairs matching IPR004653 across 148 genomes · 32 ms.

Species with hits:Hydra oligactis 7Calvadosia cruxmelitensis 5Montipora grisea 3Aurelia aurita complex sp. Pacific 2Hydra viridissima 2Cassiopea xamachana 1Hemicorallium imperiale 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold683.g2.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold683.g2.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Calvadosia cruxmelitensisg394.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Calvadosia cruxmelitensisg394.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Calvadosia cruxmelitensisg394.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Calvadosia cruxmelitensisg12.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Calvadosia cruxmelitensisg12.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Cassiopea xamachanaCxam_g2481.t1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hemicorallium imperialeevm.model.Contig132.548IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00655.G56715IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00655.G56715IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00655.G56715IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI01298.G15118IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00001.G51167IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00001.G51167IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra oligactisHOLI00001.G51167IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023798.1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023798.1IPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Montipora griseaANN31910-RAIPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Montipora griseaANN31910-RAIPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse
Montipora griseaANN31910-RAIPR004653tRNA-dihydrouridine(20/20a) synthaseInterproscanJBrowse

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