Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching IPR004845 across 148 genomes · 35 ms.

Species with hits:Aurelia aurita complex sp. Pacific 2Cassiopea xamachana 2Actinernus sp. WN-2022 1Hydra oligactis 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold683.g5.t1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1004.g11.t1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Actinernus sp. WN-2022Acti_006374-T1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Cassiopea xamachanaCxam_g18743.t1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Cassiopea xamachanaCxam_g1706.t1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Hydra oligactisHOLI00001.G52564IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023172.1IPR004845Type II secretion system protein GspD, conserved siteInterproscanJBrowse

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