Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching IPR005742 across 148 genomes · 22 ms.

Species with hits:Montipora grisea 13Actinernus sp. WN-2022 1Cassiopea xamachana 1Hydra oligactis 1Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Actinernus sp. WN-2022Acti_006327-T1IPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Cassiopea xamachanaCxam_g2147.t1IPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Hydra oligactisHOLI02858.G48370IPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023464.1IPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN33815-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN23181-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN41229-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN27813-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN37139-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN34429-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN23915-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN37091-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN30362-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN20757-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN26389-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN29927-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse
Montipora griseaANN31773-RAIPR005742DNA topoisomerase IV, subunit A, Gram-negativeInterproscanJBrowse

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