Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching IPR011109 across 148 genomes · 38 ms.

Species with hits:Hydra oligactis 6Cassiopea xamachana 3Calvadosia cruxmelitensis 2Hydra viridissima 2Paramuricea clavata 1
SpeciesGene IDInterPro termMatchSourceBrowser
Calvadosia cruxmelitensisg94.t1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Calvadosia cruxmelitensisg94.t1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Cassiopea xamachanaCxam_g6229.t1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3257.t1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3257.t1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21121IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21121IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00002.G21081IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00353.G42911IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52718IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52718IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000027164.1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000027164.1IPR011109DNA-binding recombinase domainInterproscanJBrowse
Paramuricea clavataCAB3998846.1IPR011109DNA-binding recombinase domainInterproscanJBrowse

TOP