Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching IPR011114 across 148 genomes · 47 ms.

Species with hits:Hydra oligactis 3 Hydra viridissima 3 Cassiopea xamachana 2 Dendronephthya gigantea 1 Porites compressa 1

Species	Gene ID	InterPro term	Match	Source	Browser
Cassiopea xamachana	Cxam_g2253.t1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Cassiopea xamachana	Cxam_g11273.t1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Dendronephthya gigantea	XP_028414844.1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00353.G42849	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G19455	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra oligactis	HOLI00002.G19455	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000020789.1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023519.1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Hydra viridissima	BRAKERKREP00000023519.1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse
Porites compressa	Porites_compressa_HIv1___RNAseq.g10166.t1	IPR011114	Holliday junction DNA helicase RuvA, C-terminal	Interproscan	JBrowse