Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching IPR012759 across 148 genomes · 23 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 2Hydra viridissima 1Montipora grisea 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g966.t1IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Cassiopea xamachanaCxam_g966.t1IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Hydra oligactisHOLI00001.G52590IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Hydra oligactisHOLI00001.G52590IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Hydra oligactisHOLI00014.G10485IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Hydra oligactisHOLI00014.G10485IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022924.1IPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse
Montipora griseaANN25129-RAIPR012759RNA polymerase sigma factor RpoH, proteobacteriaInterproscanJBrowse

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