Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching IPR013849 across 148 genomes · 20 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 2Hydra viridissima 1
SpeciesGene IDInterPro termMatchSourceBrowser
Cassiopea xamachanaCxam_g2253.t1IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Cassiopea xamachanaCxam_g11273.t1IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Hydra oligactisHOLI00353.G42849IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Hydra oligactisHOLI00059.G25608IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Hydra oligactisHOLI00580.G30010IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Hydra oligactisHOLI00002.G19455IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023519.1IPR013849DNA helicase, Holliday junction RuvA type, domain I, bacterialInterproscanJBrowse

TOP