Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching IPR038488 across 148 genomes · 48 ms.

Species with hits:Hydra oligactis 7Aurelia aurita complex sp. Pacific 2Cassiopea xamachana 1Hydra viridissima 1Montipora grisea 1
SpeciesGene IDInterPro termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g226.t1IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold1004.g1.t1IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Cassiopea xamachanaCxam_g2366.t1IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00299.G46703IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00001.G53584IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00059.G25950IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00059.G26367IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00001.G53061IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI02858.G48420IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00001.G51257IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022632.1IPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse
Montipora griseaANN40554-RAIPR038488Integrase, DNA-binding domain superfamilyInterproscanJBrowse

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