Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching IPR042115 across 148 genomes · 40 ms.

Species with hits:Hydra oligactis 4Actinernus sp. WN-2022 1Cassiopea xamachana 1Hydra viridissima 1Montipora grisea 1
SpeciesGene IDInterPro termMatchSourceBrowser
Actinernus sp. WN-2022Acti_006208-T1IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Cassiopea xamachanaCxam_g2248.t1IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI01498.G36319IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI02858.G48466IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00001.G52570IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Hydra oligactisHOLI00002.G17683IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023026.1IPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse
Montipora griseaANN21835-RAIPR042115Primosomal protein N', 3' DNA-binding domain superfamilyInterproscanJBrowse

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