Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PTHR33867 across 148 genomes · 5924 ms.

Species with hits:HOLIG 4MGRIS 4CXAMA 2AAURI2 1HVIRI 1
SpeciesGene IDPANTHER termMatchSourceBrowser
AAURI2scaffold272.g30.t1PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
CXAMACxam_g5518.t1PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
CXAMACxam_g6307.t1PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
HOLIGHOLI00002.G17437PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
HOLIGHOLI02195.G14016PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
HOLIGHOLI00001.G52122PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
HOLIGHOLI00522.G17056PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
HVIRIBRAKERKREP00000022393.1PTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
MGRISANN23911-RAPTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
MGRISANN34579-RAPTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
MGRISANN29880-RAPTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse
MGRISANN30028-RAPTHR33867RIBOSOME MATURATION FACTOR RIMPInterproscanJBrowse

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