Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PTHR47313 across 148 genomes · 20 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 2Aurelia aurita complex sp. Pacific 1Hydra viridissima 1Palythoa mizigama 1
SpeciesGene IDPANTHER termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1109.g14.t1PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Cassiopea xamachanaCxam_g14601.t1PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Cassiopea xamachanaCxam_g3471.t1PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Hydra oligactisHOLI00622.G31050PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Hydra oligactisHOLI00002.G17617PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Hydra oligactisHOLI00014.G9416PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Hydra oligactisHOLI00001.G51242PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022951.1PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse
Palythoa mizigamac2992.g003.t1.p1PTHR47313RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE K/LInterproscanJBrowse

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