Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 9 gene–annotation pairs matching PF00290 across 148 genomes · 29 ms.

Species with hits:Hydra oligactis 5Calvadosia cruxmelitensis 1Cassiopea xamachana 1Hydra viridissima 1Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg659.t1PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Cassiopea xamachanaCxam_g2215.t1PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra oligactisHOLI01423.G1521PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra oligactisHOLI00059.G26277PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra oligactisHOLI01423.G1522PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra oligactisHOLI02859.G40016PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra oligactisHOLI00001.G52817PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022863.1PF00290Tryptophan synthase alpha chainInterproscanJBrowse
Montipora griseaANN36348-RAPF00290Tryptophan synthase alpha chainInterproscanJBrowse

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