Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF00376 across 148 genomes · 47 ms.

Species with hits:Hydra oligactis 6Cassiopea xamachana 4Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g2395.t1PF00376MerR family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5614.t1PF00376MerR family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g3995.t1PF00376MerR family regulatory proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g3986.t1PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI01632.G57114PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00580.G30160PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00691.G35022PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G49588PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G49545PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G53443PF00376MerR family regulatory proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023548.1PF00376MerR family regulatory proteinInterproscanJBrowse

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