Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF00420 across 148 genomes · 30 ms.

Species with hits:Montipora grisea 6Hydra oligactis 4Hydractinia echinata 2Actinia tenebrosa 1Cassiopea xamachana 1Dendronephthya gigantea 1Madracis auretenra 1Micromussa lordhowensis 1Orbicella faveolata 1Rhopilema esculentum 1
SpeciesGene IDPfam termMatchSourceBrowser
Actinia tenebrosaYP_009701423.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Cassiopea xamachanaCxam_g818.t1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Dendronephthya giganteaYP_003331254.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydractinia echinataENSDJXP00000053130.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydractinia echinataENSDJXP00000054086.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydra oligactisHOLI01423.G1416PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydra oligactisHOLI00001.G49540PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydra oligactisHOLI00299.G46678PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Hydra oligactisHOLI02195.G14119PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Madracis auretenraENSIHXP00000002385.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN26501-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN24600-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN27008-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN25814-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN27020-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Montipora griseaANN30804-RAPF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Micromussa lordhowensisENSSYXP00000041795.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Orbicella faveolataYP_271959.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse
Rhopilema esculentumYP_009421332.1PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4LInterproscanJBrowse

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