Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 16 gene–annotation pairs matching PF00813 across 148 genomes · 8576 ms.

Species with hits:MGRIS 8HOLIG 3HVIRI 2AAURI2 1CXAMA 1LSCAB 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g98.t1PF00813FliP familyInterproscanJBrowse
CXAMACxam_g268.t1PF00813FliP familyInterproscanJBrowse
HOLIGHOLI00001.G51352PF00813FliP familyInterproscanJBrowse
HOLIGHOLI00014.G9282PF00813FliP familyInterproscanJBrowse
HOLIGHOLI01498.G36222PF00813FliP familyInterproscanJBrowse
HVIRIBRAKERKREP00000023608.1PF00813FliP familyInterproscanJBrowse
HVIRIBRAKERKREP00000023385.1PF00813FliP familyInterproscanJBrowse
LSCABANN35425-RAPF00813FliP familyInterproscanJBrowse
MGRISANN21213-RAPF00813FliP familyInterproscanJBrowse
MGRISANN35966-RAPF00813FliP familyInterproscanJBrowse
MGRISANN41382-RAPF00813FliP familyInterproscanJBrowse
MGRISANN33849-RAPF00813FliP familyInterproscanJBrowse
MGRISANN23871-RAPF00813FliP familyInterproscanJBrowse
MGRISANN36500-RAPF00813FliP familyInterproscanJBrowse
MGRISANN22452-RAPF00813FliP familyInterproscanJBrowse
MGRISANN33366-RAPF00813FliP familyInterproscanJBrowse

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