Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 18 gene–annotation pairs matching PF00842 across 148 genomes · 6323 ms.

Species with hits:HOLIG 5HVIRI 4MGRIS 3AAURI2 2CXAMA 2CCRUX 1LSCAB 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold1725.g12.t1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
AAURI2scaffold683.g3.t1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
CCRUXg109.t1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
CXAMACxam_g22112.t1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
CXAMACxam_g1457.t1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HOLIGHOLI00823.G35866PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HOLIGHOLI00014.G9600PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HOLIGHOLI01298.G15115PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HOLIGHOLI00001.G52994PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HOLIGHOLI00002.G20863PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HVIRIBRAKERKREP00000023856.1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HVIRIBRAKERKREP00000023614.1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HVIRIBRAKERKREP00000023148.1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
HVIRIBRAKERKREP00000024756.1PF00842Alanine racemase, C-terminal domainInterproscanJBrowse
LSCABANN35215-RAPF00842Alanine racemase, C-terminal domainInterproscanJBrowse
MGRISANN39778-RAPF00842Alanine racemase, C-terminal domainInterproscanJBrowse
MGRISANN23680-RAPF00842Alanine racemase, C-terminal domainInterproscanJBrowse
MGRISANN28808-RAPF00842Alanine racemase, C-terminal domainInterproscanJBrowse

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