Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 24 gene–annotation pairs matching PF01047 across 148 genomes · 14 ms.

Species with hits:Hydra oligactis 12Cassiopea xamachana 5Aurelia aurita complex sp. Pacific 1Calvadosia cruxmelitensis 1Hydra viridissima 1Montipora grisea 1Palythoa mizigama 1Siderastrea siderea 1Thelohanellus kitauei 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold862.g1.t1PF01047MarR familyInterproscanJBrowse
Calvadosia cruxmelitensisg50.t1PF01047MarR familyInterproscanJBrowse
Cassiopea xamachanaCxam_g5039.t1PF01047MarR familyInterproscanJBrowse
Cassiopea xamachanaCxam_g21880.t1PF01047MarR familyInterproscanJBrowse
Cassiopea xamachanaCxam_g2920.t1PF01047MarR familyInterproscanJBrowse
Cassiopea xamachanaCxam_g5311.t1PF01047MarR familyInterproscanJBrowse
Cassiopea xamachanaCxam_g6820.t1PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00001.G49451PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00001.G50344PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI01937.G38236PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00001.G51429PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00001.G49386PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00002.G21789PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00002.G18790PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00002.G19865PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00014.G9817PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00002.G19295PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00580.G29913PF01047MarR familyInterproscanJBrowse
Hydra oligactisHOLI00014.G10136PF01047MarR familyInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023409.1PF01047MarR familyInterproscanJBrowse
Montipora griseaANN36194-RAPF01047MarR familyInterproscanJBrowse
Palythoa mizigamac2585.g016.t1.p1PF01047MarR familyInterproscanJBrowse
Siderastrea sidereaFUN_026984-T1PF01047MarR familyInterproscanJBrowse
Thelohanellus kitaueiKII66254.1PF01047MarR familyInterproscanJBrowse

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