Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 11 gene–annotation pairs matching PF01050 across 148 genomes · 36 ms.

Species with hits:Hydra oligactis 5Calvadosia cruxmelitensis 2Cassiopea xamachana 2Paramuricea clavata 1Palythoa mizigama 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg1355.t1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Calvadosia cruxmelitensisg1510.t1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Cassiopea xamachanaCxam_g22114.t1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Cassiopea xamachanaCxam_g5608.t1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Hydra oligactisHOLI00622.G31210PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Hydra oligactisHOLI00059.G25847PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Hydra oligactisHOLI00001.G51913PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Hydra oligactisHOLI00001.G51212PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Hydra oligactisHOLI00059.G25622PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Paramuricea clavataCAB4030314.1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse
Palythoa mizigamac2918.g011.t1.p1PF01050Mannose-6-phosphate isomeraseInterproscanJBrowse

TOP