Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF01292 across 148 genomes · 31 ms.

Species with hits:Hydra oligactis 10Cassiopea xamachana 2Aurelia aurita complex sp. Pacific 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold4246.g1.t1PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Cassiopea xamachanaCxam_g999.t1PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Cassiopea xamachanaCxam_g2543.t1PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00014.G9533PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00001.G51299PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00059.G25774PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00002.G21167PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00014.G9597PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00001.G49940PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00622.G31126PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00001.G49679PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00823.G35965PF01292Prokaryotic cytochrome b561InterproscanJBrowse
Hydra oligactisHOLI00001.G53253PF01292Prokaryotic cytochrome b561InterproscanJBrowse

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