Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF01330 across 148 genomes · 40 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 2Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g2253.t1PF01330RuvA N terminal domainInterproscanJBrowse
Cassiopea xamachanaCxam_g11273.t1PF01330RuvA N terminal domainInterproscanJBrowse
Hydra oligactisHOLI00353.G42849PF01330RuvA N terminal domainInterproscanJBrowse
Hydra oligactisHOLI00059.G25608PF01330RuvA N terminal domainInterproscanJBrowse
Hydra oligactisHOLI00580.G30010PF01330RuvA N terminal domainInterproscanJBrowse
Hydra oligactisHOLI00002.G19455PF01330RuvA N terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023519.1PF01330RuvA N terminal domainInterproscanJBrowse

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