Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF01427 across 148 genomes · 14 ms.

Species with hits:Hydra viridissima 2Calvadosia cruxmelitensis 1Hydra oligactis 1Hydractinia symbiolongicarpus 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg520.t1PF01427D-ala-D-ala dipeptidaseInterproscanJBrowse
Hydra oligactisHOLI00002.G19463PF01427D-ala-D-ala dipeptidaseInterproscanJBrowse
Hydractinia symbiolongicarpusHSymV2.0_g02.02538_t1PF01427D-ala-D-ala dipeptidaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023329.1PF01427D-ala-D-ala dipeptidaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023329.1PF01427D-ala-D-ala dipeptidaseInterproscanJBrowse

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