Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF01520 across 148 genomes · 8144 ms.

Species with hits:HOLIG 6CXAMA 3AAURI2 1CCRUX 1HVIRI 1LSCAB 1MGRIS 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold683.g25.t1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
CCRUXg1975.t1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
CXAMACxam_g1562.t1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
CXAMACxam_g4632.t1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
CXAMACxam_g3715.t1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI00150.G1896PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI00150.G1896PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI00002.G20172PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI00002.G18582PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI01423.G1380PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HOLIGHOLI00001.G53336PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
HVIRIBRAKERKREP00000022821.1PF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
LSCABANN35376-RAPF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse
MGRISANN30401-RAPF01520N-acetylmuramoyl-L-alanine amidaseInterproscanJBrowse

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