Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF01548 across 148 genomes · 6806 ms.

Species with hits:HOLIG 5CXAMA 4MGRIS 2CCRUX 1HVIRI 1
SpeciesGene IDPfam termMatchSourceBrowser
CCRUXg139.t1PF01548TransposaseInterproscanJBrowse
CXAMACxam_g4024.t1PF01548TransposaseInterproscanJBrowse
CXAMACxam_g3351.t1PF01548TransposaseInterproscanJBrowse
CXAMACxam_g15013.t1PF01548TransposaseInterproscanJBrowse
CXAMACxam_g27234.t1PF01548TransposaseInterproscanJBrowse
HOLIGHOLI00001.G49608PF01548TransposaseInterproscanJBrowse
HOLIGHOLI00059.G25824PF01548TransposaseInterproscanJBrowse
HOLIGHOLI00059.G26029PF01548TransposaseInterproscanJBrowse
HOLIGHOLI00059.G26083PF01548TransposaseInterproscanJBrowse
HOLIGHOLI00823.G35807PF01548TransposaseInterproscanJBrowse
HVIRIBRAKERKREP00000024746.1PF01548TransposaseInterproscanJBrowse
MGRISANN35030-RAPF01548TransposaseInterproscanJBrowse
MGRISANN33445-RAPF01548TransposaseInterproscanJBrowse

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