Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 5 gene–annotation pairs matching PF01558 across 148 genomes · 28 ms.

Species with hits:Cassiopea xamachana 2Aurelia aurita complex sp. Pacific 1Hydra oligactis 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold2801.g2.t1PF01558Pyruvate ferredoxin/flavodoxin oxidoreductaseInterproscanJBrowse
Cassiopea xamachanaCxam_g11973.t1PF01558Pyruvate ferredoxin/flavodoxin oxidoreductaseInterproscanJBrowse
Cassiopea xamachanaCxam_g1176.t1PF01558Pyruvate ferredoxin/flavodoxin oxidoreductaseInterproscanJBrowse
Hydra oligactisHOLI00014.G10029PF01558Pyruvate ferredoxin/flavodoxin oxidoreductaseInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023891.1PF01558Pyruvate ferredoxin/flavodoxin oxidoreductaseInterproscanJBrowse

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