Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 8 gene–annotation pairs matching PF01943 across 148 genomes · 14 ms.

Species with hits:Cassiopea xamachana 3Hydra oligactis 3Palythoa mizigama 2
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g11565.t1PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g5604.t1PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Cassiopea xamachanaCxam_g4339.t1PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Hydra oligactisHOLI00002.G19478PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Hydra oligactisHOLI00002.G19287PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Hydra oligactisHOLI00002.G21726PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Palythoa mizigamac3017.g007.t3.p1PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse
Palythoa mizigamac3017.g007.t1.p1PF01943Polysaccharide biosynthesis proteinInterproscanJBrowse

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