Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF02153 across 148 genomes · 30 ms.

Species with hits:Hydra oligactis 4Cassiopea xamachana 2Montipora grisea 2Calvadosia cruxmelitensis 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Calvadosia cruxmelitensisg21.t1PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Cassiopea xamachanaCxam_g3948.t1PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Cassiopea xamachanaCxam_g551.t1PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Hydra oligactisHOLI00059.G26360PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50415PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G51489PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Hydra oligactisHOLI02195.G14132PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023174.1PF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Montipora griseaANN30372-RAPF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse
Montipora griseaANN29131-RAPF02153Prephenate dehydrogenase, nucleotide-binding domainInterproscanJBrowse

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