Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF02527 across 148 genomes · 28 ms.

Species with hits:Hydra oligactis 6Cassiopea xamachana 1Hydra viridissima 1Montipora grisea 1Turritopsis rubra 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g2990.t1PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00014.G9761PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00001.G52851PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00256.G40351PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00643.G15971PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra oligactisHOLI00002.G20189PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022530.1PF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Montipora griseaANN30549-RAPF02527rRNA small subunit methyltransferase GInterproscanJBrowse
Turritopsis rubraBRAKERIOWP00000003478.1PF02527rRNA small subunit methyltransferase GInterproscanJBrowse

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