Functional Domain Search

Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterPro Pfam KEGG pathway Gene Ontology PANTHER

Examples: IPR016024 PF12848 K13752 homeobox · matching is exact on the identifier and partial on the description.

Found 17 gene–annotation pairs matching PF02810 across 148 genomes · 6162 ms.

Species with hits:HOLIG 8 AAURI2 2 CXAMA 2 ASP1 1 CCRUX 1 HVIRI 1 LSCAB 1 PMIZI 1

Species	Gene ID	Pfam term	Match	Source	Browser
AAURI2	scaffold272.g32.t1	PF02810	SEC-C motif	Interproscan	JBrowse
AAURI2	scaffold10.g57.t1	PF02810	SEC-C motif	Interproscan	JBrowse
ASP1	Acti_006295-T1	PF02810	SEC-C motif	Interproscan	JBrowse
CCRUX	g286.t1	PF02810	SEC-C motif	Interproscan	JBrowse
CXAMA	Cxam_g28464.t1	PF02810	SEC-C motif	Interproscan	JBrowse
CXAMA	Cxam_g21306.t1	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00643.G15798	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00014.G10637	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00001.G51832	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00823.G35793	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00002.G19501	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00014.G9411	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00002.G20799	PF02810	SEC-C motif	Interproscan	JBrowse
HOLIG	HOLI00256.G40888	PF02810	SEC-C motif	Interproscan	JBrowse
HVIRI	BRAKERKREP00000023631.1	PF02810	SEC-C motif	Interproscan	JBrowse
LSCAB	ANN35256-RA	PF02810	SEC-C motif	Interproscan	JBrowse
PMIZI	c2701.g003.t1.p1	PF02810	SEC-C motif	Interproscan	JBrowse