Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF03313 across 148 genomes · 5421 ms.

Species with hits:HOLIG 7CXAMA 2AAURI2 1ASP1 1CCRUX 1HVIRI 1TRUBR 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g7.t1PF03313Serine dehydratase alpha chainInterproscanJBrowse
ASP1Acti_006392-T1PF03313Serine dehydratase alpha chainInterproscanJBrowse
CCRUXg174.t1PF03313Serine dehydratase alpha chainInterproscanJBrowse
CXAMACxam_g908.t1PF03313Serine dehydratase alpha chainInterproscanJBrowse
CXAMACxam_g13550.t1PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI00001.G52529PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI00001.G53837PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI01937.G38172PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI01937.G38173PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI00264.G2948PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI00059.G26415PF03313Serine dehydratase alpha chainInterproscanJBrowse
HOLIGHOLI00001.G50192PF03313Serine dehydratase alpha chainInterproscanJBrowse
HVIRIBRAKERKREP00000023802.1PF03313Serine dehydratase alpha chainInterproscanJBrowse
TRUBRBRAKERIOWP00000001499.1PF03313Serine dehydratase alpha chainInterproscanJBrowse

TOP