Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF03315 across 148 genomes · 6868 ms.

Species with hits:HOLIG 6CXAMA 2AAURI2 1ASP1 1CCRUX 1HVIRI 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold10.g7.t1PF03315Serine dehydratase beta chainInterproscanJBrowse
ASP1Acti_006392-T1PF03315Serine dehydratase beta chainInterproscanJBrowse
CCRUXg174.t1PF03315Serine dehydratase beta chainInterproscanJBrowse
CXAMACxam_g908.t1PF03315Serine dehydratase beta chainInterproscanJBrowse
CXAMACxam_g13550.t1PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI00001.G52529PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI00001.G53837PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI00264.G2948PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI00059.G26415PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI01937.G38174PF03315Serine dehydratase beta chainInterproscanJBrowse
HOLIGHOLI00001.G50192PF03315Serine dehydratase beta chainInterproscanJBrowse
HVIRIBRAKERKREP00000023802.1PF03315Serine dehydratase beta chainInterproscanJBrowse

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