Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 14 gene–annotation pairs matching PF03459 across 148 genomes · 31 ms.

Species with hits:Hydra oligactis 9Cassiopea xamachana 3Aurelia aurita complex sp. Pacific 1Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold738.g1.t1PF03459TOBE domainInterproscanJBrowse
Cassiopea xamachanaCxam_g6762.t1PF03459TOBE domainInterproscanJBrowse
Cassiopea xamachanaCxam_g263.t1PF03459TOBE domainInterproscanJBrowse
Cassiopea xamachanaCxam_g13723.t1PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53870PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50973PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50973PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2170PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2168PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52444PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53050PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15448PF03459TOBE domainInterproscanJBrowse
Hydra oligactisHOLI02137.G15454PF03459TOBE domainInterproscanJBrowse
Montipora griseaANN21817-RAPF03459TOBE domainInterproscanJBrowse

TOP