Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 22 gene–annotation pairs matching PF03739 across 148 genomes · 41 ms.

Species with hits:Hydra oligactis 10Cassiopea xamachana 4Montipora grisea 4Aurelia aurita complex sp. Pacific 2Hydra viridissima 2
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold10.g226.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold10.g226.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Cassiopea xamachanaCxam_g1492.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Cassiopea xamachanaCxam_g11547.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Cassiopea xamachanaCxam_g2024.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Cassiopea xamachanaCxam_g20802.t1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI02858.G48357PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI00655.G57002PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI00655.G57002PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI00001.G53832PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI02858.G48360PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI03250.G1083PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI00002.G17501PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI00001.G53833PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI02858.G48359PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra oligactisHOLI02858.G48356PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022481.1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023820.1PF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Montipora griseaANN31646-RAPF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Montipora griseaANN31646-RAPF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Montipora griseaANN29866-RAPF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse
Montipora griseaANN26604-RAPF03739Lipopolysaccharide export system permease LptF/LptGInterproscanJBrowse

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