Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 10 gene–annotation pairs matching PF03968 across 148 genomes · 10 ms.

Species with hits:Hydra oligactis 5Montipora grisea 2Cassiopea xamachana 1Hydra viridissima 1Stylophora pistillata 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g5532.t1PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra oligactisHOLI00299.G46667PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G53814PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra oligactisHOLI00014.G9419PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra oligactisHOLI00299.G46555PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra oligactisHOLI00001.G52390PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023283.1PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Montipora griseaANN21015-RAPF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Montipora griseaANN30734-RAPF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse
Stylophora pistillataPFX11144.1PF03968LptA/(LptD N-terminal domain) LPS transport proteinInterproscanJBrowse

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