Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 7 gene–annotation pairs matching PF03972 across 148 genomes · 26 ms.

Species with hits:Hydra viridissima 2Actinernus sp. WN-2022 1Calvadosia cruxmelitensis 1Cassiopea xamachana 1Hydra oligactis 1Montipora grisea 1
SpeciesGene IDPfam termMatchSourceBrowser
Actinernus sp. WN-2022Acti_006395-T1PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Calvadosia cruxmelitensisg1255.t1PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Cassiopea xamachanaCxam_g276.t1PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Hydra oligactisHOLI00001.G50420PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023397.1PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023296.1PF03972MmgE/PrpD N-terminal domainInterproscanJBrowse
Montipora griseaANN36466-RAPF03972MmgE/PrpD N-terminal domainInterproscanJBrowse

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