Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 6 gene–annotation pairs matching PF04273 across 148 genomes · 29 ms.

Species with hits:Hydra oligactis 2Cassiopea xamachana 2Aurelia aurita complex sp. Pacific 1Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold1199.g1.t1PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g4541.t1PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse
Cassiopea xamachanaCxam_g2355.t1PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse
Hydra oligactisHOLI00504.G55056PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse
Hydra oligactisHOLI00014.G9721PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022650.1PF04273Beta-lactamase hydrolase-like protein, phosphatase-like domainInterproscanJBrowse

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