Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 23 gene–annotation pairs matching PF06827 across 148 genomes · 13 ms.

Species with hits:Montipora grisea 10Cassiopea xamachana 4Hydra oligactis 4Hydra viridissima 2Aurelia aurita complex sp. Pacific 1Calvadosia cruxmelitensis 1Leptoseris scabra 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold3337.g1.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Calvadosia cruxmelitensisg1871.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Cassiopea xamachanaCxam_g2242.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Cassiopea xamachanaCxam_g5838.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Cassiopea xamachanaCxam_g9281.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Cassiopea xamachanaCxam_g5494.t1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra oligactisHOLI00001.G52607PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra oligactisHOLI00299.G46690PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra oligactisHOLI00059.G25992PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra oligactisHOLI00001.G52077PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023806.1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023037.1PF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Leptoseris scabraANN35386-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN40657-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN23206-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN26978-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN31681-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN20902-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN36733-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN23899-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN22990-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN37045-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse
Montipora griseaANN25273-RAPF06827Zinc finger found in FPG and IleRSInterproscanJBrowse

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