Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 15 gene–annotation pairs matching PF08501 across 148 genomes · 36 ms.

Species with hits:Hydra oligactis 8Hydra viridissima 2Aurelia aurita complex sp. Pacific 1Calvadosia cruxmelitensis 1Cassiopea xamachana 1Duncanopsammia axifuga 1Palythoa mizigama 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold272.g23.t1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Calvadosia cruxmelitensisg9.t1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Cassiopea xamachanaCxam_g28419.t1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Duncanopsammia axifugaENSXFYP00000028736.1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI01051.G37121PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00150.G2064PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00002.G19856PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G52823PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10567PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00655.G56915PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00256.G40411PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53481PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000024782.1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023052.1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse
Palythoa mizigamac2142.g001.t1.p1PF08501Shikimate dehydrogenase substrate binding domainInterproscanJBrowse

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