Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 13 gene–annotation pairs matching PF09278 across 148 genomes · 17 ms.

Species with hits:Hydra oligactis 7Cassiopea xamachana 5Hydra viridissima 1
SpeciesGene IDPfam termMatchSourceBrowser
Cassiopea xamachanaCxam_g2395.t1PF09278MerR, DNA bindingInterproscanJBrowse
Cassiopea xamachanaCxam_g5614.t1PF09278MerR, DNA bindingInterproscanJBrowse
Cassiopea xamachanaCxam_g2008.t1PF09278MerR, DNA bindingInterproscanJBrowse
Cassiopea xamachanaCxam_g3995.t1PF09278MerR, DNA bindingInterproscanJBrowse
Cassiopea xamachanaCxam_g3986.t1PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI02150.G23250PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI00643.G15951PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI01632.G57114PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI00691.G35022PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI00001.G49588PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI00001.G49545PF09278MerR, DNA bindingInterproscanJBrowse
Hydra oligactisHOLI00001.G53443PF09278MerR, DNA bindingInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000023548.1PF09278MerR, DNA bindingInterproscanJBrowse

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