Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 19 gene–annotation pairs matching PF10385 across 148 genomes · 7869 ms.

Species with hits:HOLIG 4MGRIS 3CCRUX 2HIMPE 2TRUBR 2AAURI2 1ASP1 1CSP1 1HECHI 1HVIRI 1MVIRU 1
SpeciesGene IDPfam termMatchSourceBrowser
AAURI2scaffold2493.g4.t1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
ASP1Acti_006453-T1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
CCRUXg876.t1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
CCRUXg1098.t1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
CSP1Csp0G128910PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HECHIENSDJXP00000043901.1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HIMPEevm.model.Contig133.48PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HIMPEevm.model.Contig123.284PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HOLIGHOLI00823.G36002PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HOLIGHOLI00014.G9369PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HOLIGHOLI00001.G52346PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HOLIGHOLI00002.G21995PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
HVIRIBRAKERKREP00000022662.1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
MGRISANN26340-RAPF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
MGRISANN33079-RAPF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
MGRISANN34490-RAPF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
MVIRUscaffold121.g117.t1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
TRUBRBRAKERIOWP00000001494.1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse
TRUBRBRAKERIOWP00000005626.1PF10385RNA polymerase beta subunit external 1 domainInterproscanJBrowse

TOP