Functional Domain Search

Search every annotated genome in CnidoSite by protein domain, not just by gene ID. Enter an accession (IPR016024, PF12848, K13752, GO:0005615, PTHR19143) or a free-text term (kinase, Armadillo, homeobox). One query covers 148 annotated genomes.

InterProPfamKEGG pathwayGene OntologyPANTHER
Examples: IPR016024 PF12848 K13752 homeobox  ·  matching is exact on the identifier and partial on the description.

Found 12 gene–annotation pairs matching PF11741 across 148 genomes · 18 ms.

Species with hits:Hydra oligactis 6Aurelia aurita complex sp. Pacific 2Calvadosia cruxmelitensis 1Cassiopea xamachana 1Hydra viridissima 1Leptoseris scabra 1
SpeciesGene IDPfam termMatchSourceBrowser
Aurelia aurita complex sp. Pacificscaffold683.g5.t1PF11741AMIN domainInterproscanJBrowse
Aurelia aurita complex sp. Pacificscaffold683.g25.t1PF11741AMIN domainInterproscanJBrowse
Calvadosia cruxmelitensisg1975.t1PF11741AMIN domainInterproscanJBrowse
Cassiopea xamachanaCxam_g1562.t1PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10587PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI00014.G10587PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI00150.G1896PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI02858.G48439PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI01423.G1380PF11741AMIN domainInterproscanJBrowse
Hydra oligactisHOLI00001.G53336PF11741AMIN domainInterproscanJBrowse
Hydra viridissimaBRAKERKREP00000022821.1PF11741AMIN domainInterproscanJBrowse
Leptoseris scabraANN35376-RAPF11741AMIN domainInterproscanJBrowse

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